South Africa harbours remarkable biological diversity with three of the 34 recognised global biodiversity hotspots placed within its borders. One of these is the Succulent Karoo, which together with the Nama-Karoo, forms the Greater Karoo region. Notwithstanding a paucity of studies from this region, it would appear that, although mammal diversity is low, endemism is high. Here, as part of the Karoo BioGaps project, we use a molecular approach to assess small mammal diversity and endemism in the Karoo. We focus on rock rats (Micaelamys) and elephant shrews (Elephantulus and Macroscelides). Using a DNA-informed identification approach, we reveal two, well supported, monophyletic clades of Micaelamys; one that corresponds to M. granti. Our study is the first to publish sequence data for this species. Furthermore, when unverified records are excluded, the range of M. granti is far smaller (∼99 000 km²) than that given by the IUCN red list assessments (236 027 km²), which lends support to the species being a Karoo endemic. Our macrosceledid samples grouped into four well supported clades of the genera Elephantulus and Macroscelides. Very high intraspecific diversity was present within E. pilicaudus compared with other species in our study and this newly described species may harbour cryptic diversity. Our geographic analyses confirm that the range of this species, previously considered to be a Nama-Karoo endemic, extends beyond this region. This study adds more information to the nominal data currently available for the species, Elephantulus pilicaudus.

The ontogenetic development of digestive structures in Ripon barbel (Barbus altianalis) larvae was investigated using standard histological and histochemical procedures from hatching up to 60 days after hatching (DAH). The study was conducted to determine the best period of exogenous feeding and the stage when the digestive tract is able to digest processed microdiets. Results indicated that at hatching, the digestive tract, mouth and anus were closed. The opening of the mouth and anus were observed 3–4 DAH, whereas complete separation of the entire gut was observed on 5 DAH. Exogenous feeding started 5–6 DAH, but complete yolk exhaustion occurred 7–8 DAH, indicating a period of mixed feeding. Mucosal epithelial folds were first noted 3 DAH in the anterior intestine and became profound with some goblet cells (mucous cells) by 6 DAH. At 7 DAH the mucous cells had started secreting both neutral and acid glycoconjugates. The first intestinal single loop occurred at 28–30 DAH and a double loop at 45–50 DAH. Each coiling was proceeded by larval weight increase. By 7 DAH the buccopharyngeal cavity was lined by a layer of squamous epithelial cells with scattered goblet cells and tastebuds that became numerous by 15 DAH. At hatching, the liver and the pancreas were undifferentiated, but on 3 DAH the hepatocytes and zymogen granules of the pancreas became clear. By 7 DAH both organs enlarged, making extensions into the posterior. Intestines coiling at 28–30 DAH coincided with the beginning of external dressing of the scales, a period when B. altianalis started transforming into a juvenile. By 7–8 DAH the digestive structure showed all the necessary digestive features that could enable the larvae to digest any compound diet suggesting that it may be feasible to substitute or offer a complete microdiet during larvae nursing with reduced larval mortality.

Dung beetles are important for the healthy functioning of tropical forest ecosystems, performing essential roles, including nutrient recycling and secondary seed dispersal. Sensitive to changes in both habitat quality and vertebrate diversity, dung beetles are ideal taxa for monitoring ecosystem health. The current study provides the first documentation of dung beetle diversity on the Central African island of Bioko, Equatorial Guinea, which lies off of mainland Cameroon and is characterised by a rugged topology and an elevation of more than 3 000 m. Dung beetles were sampled from three elevations (at ∼102 m, 623 m and 1 000 m) along an elevational transect, using pitfall traps baited with human dung. A total of 32 species were captured and identified. Species diversity and composition were similar to that recorded on the mainland site of Mount Cameroon, which is part of the same volcanic chain as Bioko Island. Species richness and abundance declined with increasing elevation, consistent with the inverse relationship between diversity and elevation commonly observed in other systems. Elevational preferences were apparent in several species, suggesting ecological segregation between species along the elevational gradient. The current study also provides valuable baseline data that can be used to monitor changes in ecosystem functioning and community structure, important given the potential long-term impacts of excessive bushmeat hunting on ecosystem health of Bioko Island.

The effects of agricultural landscape transformation and subsequent habitat associations have been little studied for the Agulhas long-billed lark (Certhilauda brevirostris), a regionally threatened species in the Overberg, Western Cape, South Africa. Point count surveys were conducted throughout the Overberg using distance sampling techniques. We calculated bird density and extrapolated this to a population range estimate of between 203 000 and 368 000 individuals. Using generalised linear modelling of habitat variables from the point counts, we found that the birds prefer short vegetation, regardless of habitat type or cover. Broad-scale habitat association patterns were examined using SABAP2 data to determine if reporting rate (a measure of abundance) was correlated with the proportion of natural habitat within each pentad, finding that reporting rates were lower for areas with large patches of natural vegetation and extensive road access. It remains inconclusive whether agricultural practices benefited Agulhas long-billed larks, or whether these practices mimic historical ecological processes, but the population appears secure and even increasing with the status quo.

Egyptian geese Alopochen aegyptiaca are widely reported to be territorial and aggressive. They are known to attack and sometimes kill other birds and they may attempt to usurp their nests. Here information is collated on the bird species whose nests have been used or usurped by Egyptian geese. Also presented are observations from a series of camera trap images of an Egyptian goose laying eggs and incubating in a hooded vulture Necrosyrtes monachus nest to which a juvenile hooded vulture returned repeatedly for food. Ten aggressive encounters were recorded between the Egyptian goose and the hooded vultures; the goose prevailed in five of these encounters, the vultures in four and on one occasion both vultures and goose fled the nest. This is the first time that an Egyptian goose has been recorded breeding in a hooded vulture nest. The hooded vulture chick successfully fledged and although the goose incubated for at least 20 days, for reasons unknown, its breeding attempt ultimately failed.

Although observed in other Perrisodactyla, urine overmarking in white rhinos has not been described. Using a single opportunistic sighting, we were able to collect two dung samples from one oestrous female white rhino; one unmarked and one overmarked with male urine. Because of the behaviour of both the male and the female, we suggest that the female was in pro-oestrus. We hypothesised that the function of overmarking by the male was for oestrus concealment (i.e. odour masking), as observed in horses. Because dung from oestrous female white rhinos emits a higher proportion of alkanes than non-oestrous dung, we expected the proportion of alkanes emitted from oestrous dung to decrease after overmarking. In contrast, we found that after overmarking the proportion of alkanes emitted increased. We suggest that the function of urine overmarking in white rhinos could be to conceal all signals of reproductive condition, so that neither oestrous nor non-oestrous signals are recognisable, or that a signal is added to indicate that the female has been mated.

Recent reports on finding Wolbachia-strain infections in field mosquito species in some West African countries and the potential for developing these as disease vector biocontrol tools have prompted a search for Wolbachia in mosquitoes within the study area. Using a completely randomised design, mosquito traps were set at different locations in a rural and an urbanised community. One hundred and eighty (180) mosquitoes were trapped and pooled on the basis of genus, sex and site of collection, because there have been no earlier reports of Wolbachia isolated from Nigeria. Twenty pools, made up of not more than ten mosquitoes per pool, were homogenised and analysed for Wolbachia-specific DNA. Mosquitoes were trapped within Ede (urbanised community) and Akoda (rural community). Genomic DNA was extracted from trapped mosquito samples and used as a template in a PCR reaction. The Wolbachia sp. specific 16S rRNA gene was amplified, sequence analysis of PCR products was performed and a chromatogram of the sequence was subjected to Basic Local Alignment Search Tool analysis to identify the Wolbachia sp. This sequence was subsequently submitted to GenBank with accession number MK127541. The first evidence of the presence of the endosymbiont, Wolbachia in field-caught mosquitoes is hereby documented. The homology of this strain of Wolbachia bears similarities to those reported recently from other parts of West Africa and forms a single clade with a Wolbachia sp. from Mali, with a strong bootstrap support of 99%. This finding of a Wolbachia strain in mosquitoes at Ede could form the basis for more searches for diverse strains of Wolbachia in Nigeria.