Natural resource managers are increasingly applying tree reduction treatments to piñon–juniper woodlands to meet a range of ecological, social, and economic goals. However, treatment effects on woodland-obligate bird species are not well understood. We measured multiscale avian occupancy on 29 paired (control/treatment) sites in piñon–juniper woodlands in central Colorado, USA. We conducted point counts at 232 stations, 3 times each season in 2014 and 2015. We used hierarchical multiscale modeling to obtain unbiased estimates of landscape and local occupancy (i.e. probability of use) in treated and untreated sites for 31 species. Treatments reduced the occupancy of conifer obligates, including Mountain Chickadee (Poecile gambeli), Clark's Nutcracker (Nucifraga columbiana), and White-breasted Nuthatch (Sitta carolinensis), and increased occupancy of Lark Sparrow (Chondestes grammacus) and Mountain Bluebird (Sialia currucoides). Occupancy of Virginia's Warbler (Oreothylpis virginiae) and Gray Flycatcher (Empidonax wrightii), two piñon–juniper specialists, decreased at the landscape scale in treated sites, and Pinyon Jay (Gymnorhinus cyanocephalus) occupancy decreased at the local scale. Tree reduction treatments in piñon–juniper woodlands have the potential to reduce habitat quality for a suite of bird species of conservation concern. We suggest that treatments designed to retain higher tree density and basal area will benefit conifer-obligate and piñon–juniper specialist bird species.