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1 May 2014 A universal primer set to amplify the cytochrome c oxidase subunit I gene in bears
Iram Shahzadi, Safia Janjua
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Abstract

Barcoding DNA is an accepted tool in taxonomic identification. We report the design of a universal primer pair for polymerase chain reaction (PCR) amplification of the cytochrome c oxidase subunit I gene (COI) developed using COI gene sequences of all 8 extant bear species (family Ursidae) available on GenBank. This primer pair successfully amplified approximately 700 base pairs of the COI gene of Asiatic black (Ursus thibetanus; n  =  12) and Himalayan brown (U. arctos; n  =  6) bears. We sequenced the PCR product and compared the sequences with those of the other 6 species to generate degrees of homology (83–92%) and genetic distances. The primer pair has yet to be tested in the other 6 species. We developed a preliminary phylogenetic tree for the 8 species based on these data.

International Association for Bear Research and Management
Iram Shahzadi and Safia Janjua "A universal primer set to amplify the cytochrome c oxidase subunit I gene in bears," Ursus 25(1), 73-77, (1 May 2014). https://doi.org/10.2192/URSUS-D-13-00014.1
Received: 5 June 2013; Accepted: 15 March 2014; Published: 1 May 2014
KEYWORDS
Asiatic black bear
cytochrome c oxidase subunit I (COI) gene
DNA barcoding
Himalayan brown bear
Ursidae
Ursus arctos
Ursus thibetanus
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