In this study, we investigated the biochemical composition and digestive enzyme activity during embryonic development in the marine crab, Charybdis japonica. Water, protein, and ash content increased, while levels of lipids and carbohydrates decreased significantly during embryonic development, and a marked correlation between water content and egg volume (r = 0.97; P < 0.01) was recorded. The utilization percentages of lipids and carbohydrates were 32.72% and 91.56%, respectively. The predominant essential amino acids (EAA) were lysine, leucine, arginine and valine, and the major nonessential amino acids (NEAA) were glutamic acid and aspartic acid. From the fertilized egg stage to the protozoea stage, total amino acid (TAA) concentration increased from 52.18% to 55.11% on a dry weight basis, but the ratio of EAA/TAA decreased from 52.57% to 48.90%. The quantitatively more important fatty acids were C16:0, C18:1n-9c, C16:1, C22:6n-3 (docosahexaenoic acid, DHA), and C22:2. Polyunsaturates (PUFA) and monounsaturated (MUFA) were consumed at similar rates (34.20% and 36.70%, respectively); both were consumed at higher rates than saturates (SFA) (26.56%). In particuler, n-3 fatty acids decreased significantly, with a high consumption rate of 43.74%. Activities of trypsin and pepsin increased during both the early and later embryonic stages, but decreased during the middle stages. Lipase activity increased gradually during embryonic development, except in the protozoea stage with a significant decrease, while activities of amylase and cellulase showed an ascending trend after an initial decline. The activity of all digestive enzymes increased, except for that of lipase, from the heartbeat stage to the protozoea stage.