Body size is an important functional trait to animals. Caste division of eusocial insects can exert a profound influence on their interactions with environment. We investigate the intra-specific variation of body size between caste within Odontotermes formosanus (Shiraki) (Blattodea: Termitidae), the most common and widely distributed termite species in Taiwan Island. By utilizing specimens from the NCHU Termite Collection and WorldClim data, we describe the body size distribution pattern of O. formosanus on two castes, worker and alate, and relationship with climatic factors is examined. The body size of workers is positively correlated with latitude and elevation. The body size of alates does not correlate with latitude but is positively correlated with elevation. Temperature factors negatively affect the body size of both castes. Precipitation has a positive effect on the body size of alates and no effect on workers. Additionally, humidity and temperature fluctuations over time have divergent effects on the body size of alates and workers. The results provide evidence of trait evolution decoupling at the intraspecific level, which may be shaped by climatic factors.