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Vladislav Ivanov, Gergin Blagoev, Samuel Danflous, Peter Gajdoš, Toke Thomas Høye, Kyung Min Lee, Yuri Marusik, Cecilie Lohse Mielec, Christoph Muster, Julien Pétillon, Jörg Spelda, Marko Mutanen
Holarctic species offer great opportunities to study biogeography, phylogenetics, taxonomy, and local adaptation. Species that are considered conspecific between the Palearctic and the Nearctic realms are often split into 2 or more species when denser sampling and molecular markers are applied. Similar in complexity but at a finer geographical scale are species groups having Arctic-Alpine distributions where lineages have complicated demographic histories due to glacial dynamics. In both cases, allopatric speciation might not result in fast differentiation of morphological characters if environmental conditions in isolated areas are similar and the main driver of variability is genetic drift. Here, we study the Holarctic Pardosa hyperborea (Thorell, 1872) and its closest European relatives to assess their taxonomic status and patterns of genetic variability. Based on DNA barcodes and genomic data from double-digest restriction site associated sequencing, we propose that the North American populations should be regarded as a distinct species (P. luteolaEmerton,1894, stat. resurr.), possibly consisting of several independent lineages. With the help of D-statistics, population genetic simulations and phylogenetic networks analysis, we demonstrate historical introgression among European species of the group and a likely explanation for shared DNA barcodes among allopatric and fully differentiated species. Our study exposes a promising model for studying speciation processes and demographic history in parallel on both sides of the Atlantic Ocean and demonstrates the usefulness of genomic tools in elucidating the taxonomy and biogeography of taxa across broad geographic scales.
Flea beetles (Alticini) represent one of the most diverse groups within the family Chrysomelidae and are associated with more than 100 different plant families. Conspicuously, only 10 genera account for about a quarter of flea beetle diversity, whereas about 380 genera each comprise less than 10 species, indicating different rates of diversification within the Alticini. Here, we reconstructed the phylogenetic relationships of 608 species in 101 Alticini genera using mitogenomes and cytochrome oxidase I, and applied several frameworks of clade-specific diversification rate analyses. Increased diversification rates were consistently detected in the cosmopolitan genera Altica Goffroy, Longitarsus Berthold, and Phyllotreta Chevrolat, and in neotropical taxa of the subtribe Oedionychina. In addition, we tested whether the evolution of specialized interactions with plants of the order Brassicales influenced the diversification of Phyllotreta and Psylliodes Berthold flea beetles. Specialization on Brassicales was only associated with increased diversification rates in Phyllotreta but not in Psylliodes. Our results indicate that host associations per se do not explain different diversification rates and lay the groundwork for investigating the evolutionary drivers of rapid radiations in Alticini.
Many herbivorous insect species are capable of hijacking plant development to induce novel plant organs called galls. In most groups of galling insects, the insect organs and molecular signals involved in gall induction are poorly understood. We focused on gall wasps (Hymenoptera:Cynipidae), the second largest clade of gall inducers (∼1,400 spp.), for which the developmental stages and organs responsible for gall development are unclear. We investigated the female metasomal anatomy of 69 gall-inducing and 29 non-gall-inducing species across each of the major lineages of Cynipoidea, to test relationships between this lifestyle and the relative size of secretory organs. We confirmed that the venom apparatus in gall-inducing species is greatly expanded, although gall-inducing lineages vary in the relative size of these glands. Among these gallers, we measured the largest venom gland apparatus relative to body size ever recorded in insects. Non-galling inquiline species are accompanied by a reduction of this apparatus. Comparative microscopic analysis of venom glands suggests varying venom gland content across the lineages. Some oak gallers also had enlarged accessory glands, a lipid-rich organ whose function remains unclear, and which has not been previously studied in relation to gall formation. Together, the massive expansion of secretory organs specifically in gall-inducing species suggests a role of these secretions in the process of gall formation, and the variance in size of venom glands, accessory glands, and the contents of these glands among gallers, suggests that gall formation across this clade is likely to employ a diversity of molecular strategies.
MOLECULAR PHYLOGENETICS, PHYLOGENOMICS, AND PHYLOGEOGRAPHY
Analysis of a target enrichment molecular dataset confirms the monophyly of the Neotropical montane butterfly group known as the Pronophila Westwood clade, 1 of 2 major lineages of the satyrine subtribe Pronophilina. The Pronophila clade comprises 18–20 recognized genera and some 125 species. Within this group, the genus Pseudomaniola Röber appears as paraphyletic, and is split here into 3 genera, Pseudomaniola sensu novum with 6 species, including 4 previously considered as subspecies of P. phaselis (Hewitson), the monobasic Fahraeusia Pyrcz n. gen. for Catargynnis asubaThieme, n. comb., and Boyeriana Pyrcz, Espeland & Willmott n. gen., with 9 species. The adults of all 3 genera can be recognized by their wing color patterns, but the strongest synapomorphies are found in the genitalia, especially those of the male, supporting the above systematic decisions. Notable differences are also found in scale organization and morphology. A divergence time analysis suggests that Fahraeusia diverged from Pseudomaniola + Boyeriana in the mid-Miocene, around 12 Mya, and the subsequent separation of the last 2 genera occurred at the start of the Pliocene at around 5 Mya.
Jacob A. Gorneau, Sarah C. Crews, Franklyn Cala-Riquelme, Katherine O. Montana, Joseph C. Spagna, Francesco Ballarin, Lina M. Almeida-Silva, Lauren A. Esposito
Relationships among spider families that lack support through other lines of evidence (e.g., morphology) have recently been uncovered through molecular phylogenetics. One such group is the “marronoid” clade, which contains about 3,400 described species in 9 families. Marronoids run the gamut of life history strategies, with social species, species producing a variety of silk types, and species occurring in a range of extreme environments. Despite recognition of the ecological variability in the group, there remains uncertainty about family- level relationships, leaving diverse ecologies without an evolutionary context. The phylogenies produced to date have relatively low nodal support, there are few defined morphological synapomorphies, and the internal relationships of many families remain unclear. We use 93 exemplars from all marronoid families and ultraconserved element loci captured in silico from a combination of 48 novel low-coverage whole genomes and genomic data from the Sequence Read Archive (SRA) to produce a 50% occupancy matrix of 1,277 loci from a set of ultraconserved element probes. These loci were used to infer a phylogeny of the marronoid clade and to evaluate the familial relationships within the clade, and were combined with single-locus (Sanger) legacy data to further increase taxonomic sampling. Our results indicate a clearly defined and well-supported marronoid clade and provide evidence for both monophyly and paraphyly within the currently defined families of the clade. We propose taxonomic changes in accordance with the resulting phylogenetic hypothesis, including elevating Cicurinidae (restored status) and Macrobunidae (new rank).
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