Cypermethrin is a pyrethroid insecticide with high insecticidal activity, low mammalian toxicity, and biodegradability. The present study aimed to determine the acute toxicity and evaluate the secondary toxic effects of a commercial formulation of cypermethrin on silkworm Philosamia ricini Hutt of Northeast India. The potential genotoxicity of cypermethrin on silkworm hemocyte was examined by comet assay, caspase activation, and annexin V affinity assay. Alteration in nutritional physiology and histoarchitecture of the gut region was evaluated. Additionally, immunotoxicological effect of cypermethrin was studied by phenoloxidase (PO), lysozyme assay, and abundance of circulating hemocytes. The LC₅₀ value at 24-, 48-, 72-, and 96-h exposure period was recorded as 185.96, 105.34, 72.42, and 58.41 µg/liter, respectively. Approximately sevenfold increase in mean comet tail length was observed at 24 h posttreatment with sublethal concentrations of cypermethrin. Cypermethrin also induced apoptosis and activated caspase reaction in silkworm hemocytes. Moreover, a significant decrease in digestive enzyme activity was observed at higher concentrations of cypermethrin. In cypermethrin-exposed groups, alteration in histoarchitecture was also observed in the form of ruptured microvilli and thin, deformed, fused mucous layer. The PO enzyme and lysozyme enzyme activity was also altered with sublethal concentration of cypermethrin. Total hemocyte count was reduced to 10587.10, 10052.30, 9234.30, and 8842.60 per mm³ with 10, 20, 30, and 40 µg/liter, respectively. The results offer new insights into the negative consequences of very low concentrations of cypermethrin formulations on nonmulberry silkworm of Northeast India.